PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.Z1VRT
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 266aa    MW: 29235.9 Da    PI: 8.2233
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.Z1VRTgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.21.4e-1362109254
                  HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  +++h e+ErrRR+riN  +++Lr+llP+       K +Ka+ L ++v+++k L
  Araip.Z1VRT  62 CKSHREAERRRRQRINAHLSTLRSLLPNT-----AKADKASLLAEVVKHVKRL 109
                  789*************************6.....5****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.75160109IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.2E-1162109IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-1363119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-1363113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.9E-1266115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.33E-473112No hitNo description
Gene3DG3DSA:3.30.70.2601.1E-4153201No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MLPFGGRFYG FESWLDQPHQ HDSSPSDGFF VPEAPFKATD LLFDGAGRSS KLDNNRKSTE  60
ACKSHREAER RRRQRINAHL STLRSLLPNT AKADKASLLA EVVKHVKRLK KEADDVARDP  120
SKPDAEAEPW PFPGESDEAT LSYCDGEPNL VKATLCCEDR PGLNRDLTHA IRSVRAKAVR  180
AEMMTVGGRT KSAVVIQWPA ASGGGDSKEG VEVGALERAL KAVIENRALV GSGMGRFVLG  240
QKRAWNSYDS PDEVDCTFLL NRDASK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016165598.10.0PREDICTED: transcription factor bHLH30-like
TrEMBLA6XN041e-85A6XN04_PRUPE; Putative uncharacterized protein
STRINGGLYMA02G37720.16e-83(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF114412834
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.18e-33bHLH family protein